nsp9 Google Drive Data
Non-structural protein 9 (nsp9)– nsp9 may participate in viral replication by acting as a ssRNA-binding protein.2 Nsp9 and nsp10 interact with NKRF, an NF-КB repressor, and may cause a IL-8/IL-6 mediated chemotaxis of neutrophils and overexuberant host inflammatory response.15 Nsp9 has also been shown to interact with nsp8 as well.4

nsp9 3,386 Sequences
Amino Acid | AA | AA | Conservation | Conservation Z-score | RMSD_CA | RMSF[A] | Secondary Structure | DCCM >0.9 |
4141 | N | ASN | 99.94093325 | 1.543147134 | 3.295 | 3.973 | C | 0 |
4142 | N | ASN | 99.88186651 | 1.54143175 | 3.468 | 3.041 | C | 0 |
4143 | E | GLU | 99.88186651 | 1.54143175 | 3.388 | 2.69 | E | 0 |
4144 | L | LEU | 42.35085647 | -0.129352084 | 3.694 | 3.503 | E | 0 |
4145 | S | SER | 8.535144714 | -1.111409317 | 2.355 | 2.082 | E | 0 |
4146 | P | PRO | 95.95392794 | 1.427358726 | 4.215 | 2.466 | C | 0 |
4147 | V | VAL | 8.623744832 | -1.108836241 | 2.897 | 2.234 | C | 0 |
4148 | A | ALA | 8.682811577 | -1.107120857 | 2.449 | 1.351 | C | 0 |
4149 | L | LEU | 75.07383343 | 0.820970548 | 1.657 | 1.205 | C | 0 |
4150 | R | ARG | 10.18901359 | -1.06337857 | 1.664 | 1.958 | E | 0 |
4151 | Q | GLN | 32.66391022 | -0.410675029 | 1.599 | 1.463 | E | 0 |
4152 | M | MET | 32.42764324 | -0.417536564 | 1.53 | 1.224 | E | 0 |
4153 | S | SER | 25.33963379 | -0.623382622 | 1.687 | 1.059 | E | 0 |
4154 | C | CYS | 24.06969876 | -0.660263374 | 1.094 | 0.851 | E | 0 |
4155 | A | ALA | 8.741878323 | -1.105405473 | 1.145 | 0.965 | E | 0 |
4156 | A | ALA | 83.37271116 | 1.061981974 | 1.318 | 0.894 | E | 0 |
4157 | G | GLY | 61.54754873 | 0.428147655 | 1.103 | 0.77 | E | 0 |
4158 | T | THR | 8.682811577 | -1.107120857 | 0.983 | 1.36 | C | 0 |
4159 | T | THR | 14.79621973 | -0.929578632 | 1.335 | 1.257 | T | 1 |
4160 | Q | GLN | 34.14057885 | -0.367790434 | 1.878 | 1.244 | T | 2 |
4161 | T | THR | 18.87182516 | -0.811217149 | 2.418 | 1.655 | T | 2 |
4162 | A | ALA | 8.860011813 | -1.101974706 | 2.184 | 1.395 | T | 1 |
4163 | C | CYS | 8.505611341 | -1.112267008 | 2.09 | 1.288 | C | 0 |
4164 | T | THR | 8.653278204 | -1.107978549 | 1.708 | 1.432 | T | 0 |
4165 | D | ASP | 8.535144714 | -1.111409317 | 2.778 | 1.655 | T | 0 |
4166 | D | ASP | 8.505611341 | -1.112267008 | 1.586 | 1.322 | T | 0 |
4167 | N | ASN | 9.48021264 | -1.083963176 | 1.644 | 1.097 | T | 0 |
4168 | A | ALA | 11.42941524 | -1.02735551 | 1.478 | 0.889 | E | 0 |
4169 | L | LEU | 31.57117543 | -0.44240963 | 1.362 | 1.477 | E | 0 |
4170 | A | ALA | 66.89308919 | 0.58338989 | 1.189 | 0.83 | E | 0 |
4171 | Y | TYR | 61.78381571 | 0.435009191 | 1.266 | 1.178 | E | 0 |
4172 | Y | TYR | 92.61665682 | 1.330439541 | 1.404 | 0.897 | E | 0 |
4173 | N | ASN | 48.55286474 | 0.050763217 | 1.103 | 1.367 | E | 0 |
4174 | T | THR | 11.81334908 | -1.016205515 | 2.232 | 2.462 | E | 0 |
4175 | T | THR | 3.573538098 | -1.255501557 | 3.849 | 2.599 | E | 1 |
4176 | K | LYS | 9.214412286 | -1.091682403 | 4.533 | 3.906 | T | 1 |
4177 | G | GLY | 85.67631424 | 1.128881943 | 3.492 | 2.852 | T | 0 |
4178 | G | GLY | 22.79976373 | -0.697144126 | 2.852 | 2.189 | E | 0 |
4179 | R | ARG | 11.9019492 | -1.013632439 | 1.381 | 2.113 | E | 0 |
4180 | F | PHE | 42.91199055 | -0.113055938 | 1.141 | 1.133 | E | 0 |
4181 | V | VAL | 39.95865328 | -0.198825128 | 1.081 | 0.898 | E | 0 |
4182 | L | LEU | 8.535144714 | -1.111409317 | 1.088 | 1.14 | E | 0 |
4183 | A | ALA | 98.31659776 | 1.495974079 | 1.152 | 0.746 | E | 0 |
4184 | L | LEU | 33.04784406 | -0.399525034 | 1.277 | 0.894 | E | 0 |
4185 | L | LEU | 46.89899587 | 0.00273247 | 1.424 | 1.073 | E | 0 |
4186 | S | SER | 86.35558181 | 1.148608857 | 1.358 | 0.687 | E | 0 |
4187 | D | ASP | 66.09568813 | 0.560232209 | 1.279 | 0.998 | C | 0 |
4188 | L | LEU | 1.949202599 | -1.302674612 | 1.237 | 1.273 | C | 0 |
4189 | Q | GLN | 8.476077968 | -1.1131247 | 1.111 | 1.569 | C | 0 |
4190 | D | ASP | 34.43591258 | -0.359213515 | 1.008 | 1.5 | C | 0 |
4191 | L | LEU | 96.54459539 | 1.444512564 | 0.761 | 0.916 | C | 0 |
4192 | K | LYS | 81.6007088 | 1.01052046 | 0.765 | 1.771 | E | 0 |
4193 | W | TRP | 31.48257531 | -0.444982705 | 1.019 | 0.957 | E | 0 |
4194 | A | ALA | 47.96219728 | 0.033609378 | 1.505 | 0.901 | E | 0 |
4195 | R | ARG | 30.68517425 | -0.468140387 | 1.597 | 1.706 | E | 0 |
4196 | F | PHE | 24.06969876 | -0.660263374 | 0.935 | 1.438 | E | 0 |
4197 | P | PRO | 8.505611341 | -1.112267008 | 3.319 | 1.49 | E | 0 |
4198 | K | LYS | 9.066745422 | -1.095970862 | 5.517 | 2.424 | E | 0 |
4199 | S | SER | 9.303012404 | -1.089109327 | 8.73 | 2.656 | T | 0 |
4200 | D | ASP | 20.82102776 | -0.754609484 | 8.663 | 3.17 | T | 1 |
4201 | G | GLY | 9.184878913 | -1.092540095 | 7.853 | 2.826 | T | 1 |
4202 | T | THR | 8.446544595 | -1.113982392 | 5.617 | 2.921 | C | 0 |
4203 | G | GLY | 59.53927939 | 0.369824606 | 3.914 | 1.972 | E | 1 |
4204 | T | THR | 8.505611341 | -1.112267008 | 1.55 | 1.771 | E | 1 |
4205 | I | ILE | 31.36444182 | -0.448413473 | 2.768 | 2.274 | E | 0 |
4206 | Y | TYR | 23.68576491 | -0.671413369 | 1.606 | 1.257 | E | 0 |
4207 | T | THR | 7.501476669 | -1.141428533 | 0.949 | 0.908 | E | 0 |
4208 | E | GLU | 80.77377437 | 0.986505086 | 0.768 | 1.203 | E | 0 |
4209 | L | LEU | 99.94093325 | 1.543147134 | 0.793 | 0.831 | C | 0 |
4210 | E | GLU | 40.72652097 | -0.176525139 | 0.819 | 0.997 | C | 0 |
4211 | P | PRO | 89.3975192 | 1.236951123 | 1.098 | 1.007 | C | 0 |
4212 | P | PRO | 99.64559953 | 1.534570215 | 1.344 | 0.978 | C | 0 |
4213 | C | CYS | 70.31896043 | 0.682882152 | 1.247 | 1.108 | E | 0 |
4214 | R | ARG | 25.93030124 | -0.606228784 | 1.169 | 1.842 | E | 0 |
4215 | F | PHE | 99.97046663 | 1.544004826 | 1.609 | 0.948 | E | 0 |
4216 | V | VAL | 11.69521559 | -1.019636283 | 1.798 | 1.326 | E | 0 |
4217 | T | THR | 8.535144714 | -1.111409317 | 2.088 | 1.327 | E | 0 |
4218 | D | ASP | 35.94211459 | -0.315471227 | 2.317 | 1.479 | C | 0 |
4219 | T | THR | 16.68635558 | -0.87468635 | 3.13 | 1.664 | T | 1 |
4220 | P | PRO | 58.56467809 | 0.341520773 | 3.786 | 2.449 | T | 2 |
4221 | K | LYS | 46.01299468 | -0.022998287 | 3.359 | 2.935 | T | 1 |
4222 | G | GLY | 70.76196102 | 0.69574753 | 2.65 | 1.663 | T | 0 |
4223 | P | PRO | 47.46012995 | 0.019028616 | 2.122 | 1.483 | C | 0 |
4224 | K | LYS | 22.85883048 | -0.695428742 | 1.961 | 1.909 | E | 0 |
4225 | V | VAL | 40.16538689 | -0.192821285 | 1.665 | 1.19 | E | 0 |
4226 | K | LYS | 56.61547549 | 0.284913107 | 1.291 | 1.12 | E | 0 |
4227 | Y | TYR | 99.23213231 | 1.522562528 | 1.008 | 0.788 | E | 0 |
4228 | L | LEU | 99.85233314 | 1.540574058 | 1.185 | 0.981 | E | 0 |
4229 | Y | TYR | 99.88186651 | 1.54143175 | 1.069 | 0.588 | E | 0 |
4230 | F | PHE | 98.64146486 | 1.50540869 | 0.721 | 0.767 | E | 0 |
4231 | I | ILE | 29.09037212 | -0.51445575 | 0.639 | 1.034 | E | 0 |
4232 | K | LYS | 76.87536917 | 0.873289755 | 0.805 | 1.592 | T | 0 |
4233 | G | GLY | 22.85883048 | -0.695428742 | 0.943 | 0.95 | T | 0 |
4234 | L | LEU | 66.74542233 | 0.579101431 | 0.805 | 1.033 | T | 0 |
4235 | N | ASN | 79.79917307 | 0.958201253 | 0.923 | 1.435 | H | 0 |
4236 | N | ASN | 37.18251624 | -0.279448167 | 0.826 | 1.066 | H | 0 |
4237 | L | LEU | 84.31777909 | 1.089428115 | 0.932 | 1.2 | H | 0 |
4238 | N | ASN | 12.40401654 | -0.999051677 | 0.79 | 1 | H | 0 |
4239 | R | ARG | 99.79326639 | 1.538858674 | 0.721 | 0.898 | H | 0 |
4240 | G | GLY | 99.88186651 | 1.54143175 | 0.891 | 0.749 | H | 0 |
4241 | M | MET | 28.05670408 | -0.544474966 | 0.84 | 1.419 | H | 0 |
4242 | V | VAL | 96.98759598 | 1.457377943 | 0.863 | 0.995 | H | 0 |
4243 | L | LEU | 82.27997637 | 1.030247374 | 1.077 | 0.953 | H | 0 |
4244 | G | GLY | 99.73419965 | 1.53714329 | 1.266 | 0.873 | H | 0 |
4245 | S | SER | 8.38747785 | -1.115697776 | 1.415 | 1.056 | H | 0 |
4246 | L | LEU | 12.58121677 | -0.993905525 | 1.319 | 1.466 | H | 0 |
4247 | A | ALA | 32.48670998 | -0.415821181 | 1.695 | 1.179 | H | 0 |
4248 | A | ALA | 66.09568813 | 0.560232209 | 2.238 | 1.381 | H | 0 |
4249 | T | THR | 83.99291199 | 1.079993504 | 2.291 | 1.35 | H | 0 |
4250 | V | VAL | 91.2285883 | 1.290128021 | 2.175 | 1.59 | H | 0 |
4251 | R | ARG | 79.94683993 | 0.962489713 | 2.701 | 2.235 | C | 0 |
4252 | L | LEU | 99.85233314 | 1.540574058 | 2.053 | 1.385 | C | 0 |
4253 | Q | GLN | 99.37979917 | 1.526850987 | 2.951 | 2.013 | C | 0 |
2. I-TASSER server for protein structure and function prediction [Internet]. [cited 2020 Apr 12];Available from: https://zhanglab.ccmb.med.umich.edu/I-TASSER/
4. Rani R, Singh A, Pareek A, Tomar S. In silico Guided Drug Repurposing to Combat SARS-CoV-2 by Targeting Mpro, the key virus specific protease. 2020;
15. Li J, Guo M, Tian X, et al. Virus-host interactome and proteomic survey of PMBCs from COVID-19 patients reveal potential virulence factors influencing SARS-CoV-2 pathogenesis. bioRxiv 2020;2020.03.31.019216.